by PDBeurope · MCP Server · ★ 36
PDBe MCP Servers A set of Model Context Protocol (MCP) servers that provides seamless access to the Protein Data Bank in Europe (PDBe) API and PDBe Search. These servers expose PDBe's comprehensive structural biology data as MCP tools, enabling direct integration with any AI client that supports MCP. The package also includes an advanced PDBe Graph server for users who run their own local PDBe-KB Neo4j graph database. PDBe does not provide a public running graph database instance for this MCP server to query, so most users should start with the API and Search servers.
| Stars | 36 |
| Forks | 1 |
| Language | Python |
| Category | MCP Server |
| License | Apache-2.0 |
| Quality Score | 75.8419751416066/100 |
| Open Issues | 1 |
| Last Updated | 2026-06-25 |
| Created | 2025-06-08 |
| Platforms | mcp, python |
| Est. Tokens | ~17k |
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PDBe-MCP-Servers is PDBe MCP Servers integrate Protein Data Bank Europe resources with LLMs via Model Context Protocol. Provides seamless access to protein structure data through API tools and graph database schema assis. It is categorized as a MCP Server with 36 GitHub stars.
PDBe-MCP-Servers is primarily written in Python. It covers topics such as ai-integration, api-server, bioinformatics.
You can find installation instructions and usage details in the PDBe-MCP-Servers GitHub repository at github.com/PDBeurope/PDBe-MCP-Servers. The project has 36 stars and 1 forks, indicating an active community.
PDBe-MCP-Servers is released under the Apache-2.0 license, making it free to use and modify according to the license terms.